კუჭნაწლავის მიკრობიომის სტრუქტურა და დინამიკა ადამიანსა და ექსპერიმენტულ ცხოველებში
DOI:
https://doi.org/10.52340/jecm.2024.03.04საკვანძო სიტყვები:
gut, microbiome, human, experimental animalsანოტაცია
ადამიანის მიკრობიომი ტრილიონობით ბაქტერიას, სოკოსა და ვირუსს მოიცავს. ის მნიშვნელოვან გავლენას ახდენს ჩვენს ორგანიზმსა და გარემოზეც. წარმოდგენილ კვლევაში აქცენტია ადამიანისა და მიკრობების სიმბიოზზე, რამაც მათი თანაევოლუცია გამოიწვია სუპერორგანიზმად. სიცოცხლის განმავლობაში საჭმლის მომნელებელი ტრაქტის მიკრობიომი გავლენას ახდენს იმუნური, ნერვული და კარდიოვასკულური სისტემის ჰომეოსტაზზე. მიკრობიომის დინამიკის ცოდნა პერსონალიზებული მედიცინისა და მიკრობული დისბიოზის თერაპიული ინტერვენციების კვლევაში დაგვეხმარება.
Downloads
წყაროები
Berg, G., Rybakova, D., Fischer, D. et al. Microbiome definition re-visited: old concepts and new challenges. Microbiome 8, 103 (2020). https://doi.org/10.1186/s40168-020-00875-0
Ursell LK, Metcalf JL, Parfrey LW, Knight R. Defining the human microbiome. Nutr Rev. 2012 Aug;70 Suppl 1(Suppl 1):S38-44. doi: 10.1111/j.1753-4887.2012.00493.x.
Hu, Y. (2023). Ecosystem Microbiome Science. mLife. Wiley Online Library. https://onlinelibrary.wiley.com/doi/10.1002/mlf2.12054
Dominguez-Bello MG, Godoy-Vitorino F, Knight R, et al Role of the microbiome in human development Gut 2019;68:1108-1114.
Dietert, R.R.; Dietert, J.M. The Human Superorganism: Using Microbes for Freedom vs. Fear. Appl. Microbiol. 2023, 3, 883-905. https://doi.org/10.3390/applmicrobiol3030061
Salvucci E. The human-microbiome superorganism and its modulation to restore health. Int J Food Sci Nutr. 2019 Nov;70(7):781-795.
Gilbert JA, Blaser MJ, Caporaso JG, Jansson JK, Lynch SV, Knight R. Current understanding of the human microbiome. Nat Med. 2018 Apr 10;24(4):392-400. doi: 10.1038/nm.4517.
Yan Wang, Lloyd H. Kasper., The role of microbiome in central nervous system disorders. Brain, Behavior, and Immunity. Volume 38, May 2014, Pages 1-12
M.M. Rahman et al., The Gut Microbiota (Microbiome) in Cardiovascular Disease and Its Therapeutic Regulation. Front. Cell. Infect. Microbiol., 20 June 2022, Sec. Microbiome in Health and Disease, Volume 12 - 2022 | https://doi.org/10.3389/fcimb.2022.903570
Yoredy Sarmiento-Andrade et al., Gut microbiota and obesity: New insights. Front. Nutr., 14 October 2022, Sec. Clinical Nutrition, Volume 9 - 2022 | https://doi.org/10.3389/fnut.2022.1018212
Iatcu CO, Steen A, Covasa M. Gut Microbiota and Complications of Type-2 Diabetes. Nutrients. 2021 Dec 30;14(1):166. doi: 10.3390/nu14010166.
Bunyavanich S, Berin MC. Food allergy and the microbiome: Current understandings and future directions. J Allergy Clin Immunol. 2019 Dec;144(6):1468-1477.
C. Najem et al., DEFINING THE GUT MICROBIOME IN PATIENTS WITH ANCA-ASSOCIATED VASCULITIS. Annals of the Rheumatoid Diseases, Volume 78, Issue Suppl 2, 2019; DOI: 10.1136/annrheumdis-2019-eular.8322
Ma, Q., Xing, C., et al. Impact of microbiota on central nervous system and neurological diseases: the gut-brain axis. J Neuroinflammation 16, 53 (2019). https://doi.org/10.1186/s12974-019-1434-3
Liang S, Wu X and Jin F (2018) Gut-Brain Psychology: Rethinking Psychology From the Microbiota–Gut–Brain Axis. Front. Integr. Neurosci. 12:33. doi: 10.3389/fnint.2018.00033
Olsen I, Yamazaki K. Can oral bacteria affect the microbiome of the gut? J Oral Microbiol. 2019 Mar 18;11(1):1586422. doi: 10.1080/20002297.2019.1586422.
17.Clark J.A., Coopersmith C.M. Intestinal crosstalk: A new paradigm for understanding the gut as the “motor” of critical illness. Shock. 2007;28:384–393.
Yu, Y., Zhu, S., Li, P. et al. Helicobacter pylori infection and inflammatory bowel disease: a crosstalk between upper and lower digestive tract. Cell Death Dis 9, 961 (2018). https://doi.org/10.1038/s41419-018-0982-2
Kastl AJ Jr, Terry NA, Wu GD, Albenberg LG. The Structure and Function of the Human Small Intestinal Microbiota: Current Understanding and Future Directions. Cell Mol Gastroenterol Hepatol. 2020;9(1):33-45. doi: 10.1016/j.jcmgh.2019.07.006. Epub 2019 Jul
Zhu B, Wang X, Li L. Human gut microbiome: the second genome of human body. Protein Cell. 2010 Aug;1(8):718-25. doi: 10.1007/s13238-010-0093-z. Epub 2010 Aug 28. Med. 2015 Feb;21(2):109-17. doi: 10.1016/j.molmed.2014.12.002. Epub 2014 Dec 11. PMID: 25578246; PMCID: PMC4464665.
Mueller NT, Bakacs E, Combellick J, Grigoryan Z, Dominguez-Bello MG. The infant microbiome development: mom matters. Trends Mol Med. 2015 Feb;21(2):109-17. doi: 10.1016/j.molmed.2014.12.002. Epub 2014 Dec 11. PMID: 25578246; PMCID: PMC4464665.
Clarridge JE 3rd. Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases. Clin Microbiol Rev. 2004 Oct;17(4):840-62, table of contents. doi: 10.1128/CMR.17.4.840-862.2004. PMID: 15489351; PMCID: PMC523561.
Liang Cheng, Changlu Qi, Haixiu Yang, et al. gutMGene: a comprehensive database for target genes of gut microbes and microbial metabolites, Nucleic Acids Research, 50(D1), 7 Jan 2022; D795–D800
Lai LA, Tong Z, Chen R, Pan S. Metaproteomics Study of the Gut Microbiome. Methods Mol Biol. 2019;1871:123-132. doi: 10.1007/978-1-4939-8814-3_8. PMID: 30276736.
M.A. Farag et al., The use of omics in monitoring food gut microbiota interaction outcomes: a review of novel trends and technologies. Current Opinion in Food Science, Volume 52, August 2023, 101064, doi: 10.1016/j.cofs.2023.101064
Hertli S, Zimmermann P. Molecular interactions between the intestinal microbiota and the host. Mol Microbiol. 2022 Jun;117(6):1297-1307. doi: 10.1111/mmi.14905.
Dieterich W, Schink M, Zopf Y. Microbiota in the Gastrointestinal Tract. Med Sci (Basel). 2018 Dec 14;6(4):116. doi: 10.3390/medsci6040116.
Korecka A, Arulampalam V. The gut microbiome: scourge, sentinel or spectator?. J Oral Microbiol. 2012;4(1):9367. doi: 10.3402/jom.v4i0.9367.
C. Feng et al., Microbiota-derived short chain fatty acids: Their role and mechanisms in viral infections Biomedicine & Pharmacotherapy Volume 160, April 2023, 114414
Martin-Gallausiaux C, Marinelli L, Blottière HM, Larraufie P, Lapaque N. SCFA: mechanisms and functional importance in the gut. Proc Nutr Soc. 2021 Feb;80(1):37-49.
Wan Z, Zheng J, Zhu Z, Sang L, et al. Intermediate role of gut microbiota in vitamin B nutrition and its influences on human health. Front Nutr. 2022 Dec 13;9:1031502. doi: 10.3389/fnut.2022.1031502
Wibowo, S., & Pramadhani, A. (2024). Vitamin B, Role of Gut Microbiota and Gut Health. IntechOpen. doi: 10.5772/intechopen.109485
Amann RI, Ludwig W, Schleifer KH. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev. 1995 Mar;59(1):143-69.
Chen Y, Xu J, Chen Y. Regulation of Neurotransmitters by the Gut Microbiota and Effects on Cognition in Neurological Disorders. Nutrients. 2021 Jun 19;13(6):2099.
Bohórquez, Diego V.; Samsa, Leigh A.; et al. (2014). "An enteroendocrine cell-enteric glia connection revealed by 3D electron microscopy". PLOS ONE. 9 (2): e89881.
Niall P. Hyland, John F. Cryan, Microbe-host interactions: Influence of the gut microbiota on the enteric nervous system. Developmental Biology, Volume 417, Issue 2, 15 September 2016, Pages 182-187, doi: 0.1016/j.ydbio.2016.06.027
Yang J, Pu J, Lu S, Bai X, Wu Y, Jin D, et al. (2020) Species-Level Analysis of Human Gut Microbiota With Metataxonomics. Front. Microbiol. 11:2029. doi: 10.3389/fmicb.2020.02029
Amaral P, Carbonell-Sala S, De La Vega FM et al.The status of the human gene catalogue. ArXiv. 2023 Mar 24:arXiv:2303.13996v1. Update in: Nature. 2023 Oct;622(7981):41-47.
B. A. H. Jensen et al., Small intestine vs. colon ecology and physiology: Why it matters in probiotic administration. Cell Reports Medicine 4, 101190, Sept 19, 2023. doi: 10.1016/j.xcrm.2023.101190
Owen R.L., Jones A.L. (1974) Epithelial cell specialization within human Peyer’s patches: an ultrastructural study of intestinal lymphoid follicles. Gastroenterology 66, 189–203
Neutra M.R., Pringault E., Kraehenbuhl J.-P. (1996) Antigen sampling across epithelial barriers and induction of mucosal immune responses. Annu. Rev. Immunol. 14, 275–300
Kraehenbuhl J.P., Neutra M.R. (2000) Epithelial M cells: differentiation and function. Annu. Rev. Cell. Dev. Biol. 16, 301–332
Ohno H. Intestinal M cells. J Biochem. 2016 Feb;159(2):151-60. doi: 10.1093/jb/mvv121.
Kanaya T., Ohno H. (2014) The mechanisms of M-cell differentiation. Biosci. Microbiota Food Health 33, 91–97
Kubelkova, K., Benuchova, M., Kozakova, H. et al. Gnotobiotic mouse model’s contribution to understanding host–pathogen interactions. Cell. Mol. Life Sci. 73, 3961–3969 (2016).
Thompson GR, Trexler PC (1971) Gastrointestinal structure and function in germ-free or gnotobiotic animals. Gut 12:230–235
Cebra JJ (1999) Influences of microbiota on intestinal immune system development. Am J Clin Nutr 69:1046S–1051S
Yassour, M. et al. Strain-level analysis of mother-to-child bacterial transmission during the first few months of life. Cell Host Microbe 24, 146–154.e144 (2018).
Rothschild, D. et al. Environment dominates over host genetics in shaping human gut microbiota. Nature 555, 210–215 (2018).
Hasan N, Yang H. Factors affecting the composition of the gut microbiota, and its modulation. PeerJ. 2019 Aug 16;7:e7502. doi: 10.7717/peerj.7502.
Badal VD, Vaccariello ED, Murray ER, Yu KE, Knight R, Jeste DV, Nguyen TT. The Gut Microbiome, Aging, and Longevity: A Systematic Review. Nutrients. 2020 Dec 7;12(12):3759.
Parker, A., Romano, S., Ansorge, R. et al. Fecal microbiota transfer between young and aged mice reverses hallmarks of the aging gut, eye, and brain. Microbiome 10, 68 (2022). https://doi.org/10.1186/s40168-022-01243-w
Kim, K.H., Chung, Y., Huh, JW. et al. Gut microbiota of the young ameliorates physical fitness of the aged in mice. Microbiome 10, 238 (2022). https://doi.org/10.1186/s40168-022-01386-w
B.P. Popkin., Urbanization, Lifestyle Changes and the Nutrition Transition. World Development Vol. 27, No. 11, pp. 1905±1916, 1999
Yatsunenko T, Rey FE, Manary MJ et al. Human gut microbiome viewed across age and geography. Nature. 2012 May 9;486(7402):222-7. doi: 10.1038/nature11053
56.Young V B. The role of the microbiome in human health and disease: an introduction for clinicians BMJ 2017; 356 :j831 doi:10.1136/bmj.j831
Vijay, A., Valdes, A.M. Role of the gut microbiome in chronic diseases: a narrative review. Eur J Clin Nutr 76, 489–501 (2022). https://doi.org/10.1038/s41430-021-00991-6
Rao SSC, Bhagatwala J. Small Intestinal Bacterial Overgrowth: Clinical Features and Therapeutic Management. Clin Transl Gastroenterol. 2019 Oct;10(10):e00078.
Plavec, T.V., Berlec, A. Engineering of lactic acid bacteria for delivery of therapeutic proteins and peptides. Appl Microbiol Biotechnol 103, 2053–2066 (2019).
ჩამოტვირთვები
გამოქვეყნებული
როგორ უნდა ციტირება
გამოცემა
სექცია
